restructured
* add selector frontend * basic celery backend * client libraryactivity_mapper
parent
e254667256
commit
2c8eea0e6f
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@ -0,0 +1,10 @@
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FROM alpine:edge
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ADD ["requirements.txt", "/"]
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RUN echo "http://dl-cdn.alpinelinux.org/alpine/edge/testing/" >> /etc/apk/repositories && \
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sed -i 's/numpy/#numpy/' requirements.txt && \
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sed -i 's/scipy/#scipy/' requirements.txt && \
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apk add --update libpng libpng-dev freetype freetype-dev g++ python3 py3-numpy python3-dev py-numpy-dev py3-scipy&& \
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pip3 install -r requirements.txt && \
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apk del libpng-dev freetype-dev g++ python3-dev py-numpy-dev && \
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rm requirements.txt
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@ -12,7 +12,7 @@ from .render import Render
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from .render.biogames import SimulationRoundsRender, BoardDurationHistRender, BoardDurationBoxRender, \
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from .render.biogames import SimulationRoundsRender, BoardDurationHistRender, BoardDurationBoxRender, \
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ActivityMapperRender, StoreRender, SimulationOrderRender, SimulationGroupRender
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ActivityMapperRender, StoreRender, SimulationOrderRender, SimulationGroupRender
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from .render.default import PrintRender, JSONRender, TrackRender, HeatMapRender, LogEntryCountAnalyzerPlot, \
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from .render.default import PrintRender, JSONRender, TrackRender, HeatMapRender, LogEntryCountAnalyzerPlot, \
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LogEntryCountCSV
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LogEntryCountCSV, KMLRender
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from .render.locomotion import LocomotionActionRelativeRender, LocomotionActionAbsoluteRender, \
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from .render.locomotion import LocomotionActionRelativeRender, LocomotionActionAbsoluteRender, \
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LocomotionActionRatioRender
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LocomotionActionRatioRender
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@ -41,6 +41,7 @@ __MAPPING__ = {
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LocationAnalyzer: [
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LocationAnalyzer: [
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TrackRender,
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TrackRender,
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HeatMapRender,
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HeatMapRender,
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KMLRender,
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],
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],
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ActivityMapper: [
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ActivityMapper: [
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ActivityMapperRender
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ActivityMapperRender
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@ -2,7 +2,7 @@ import logging
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from collections import KeysView
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from collections import KeysView
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from typing import Type, Sized, Collection
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from typing import Type, Sized, Collection
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from analyzers.settings import LogSettings
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from analysis.analyzers.settings import LogSettings
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log: logging.Logger = logging.getLogger(__name__)
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log: logging.Logger = logging.getLogger(__name__)
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@ -3,8 +3,8 @@ from collections import defaultdict, namedtuple, OrderedDict
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from types import SimpleNamespace
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from types import SimpleNamespace
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from typing import List, NamedTuple
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from typing import List, NamedTuple
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from util import json_path, combinate
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from analysis.util import json_path, combinate
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from util.download import download_board, get_board_data
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from analysis.util.download import download_board, get_board_data
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from . import Result, LogSettings, Analyzer, ResultStore
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from . import Result, LogSettings, Analyzer, ResultStore
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from .default import CategorizerStub, Store
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from .default import CategorizerStub, Store
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@ -174,13 +174,13 @@ class ActivityMapper(Analyzer):
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board["image"] = "simu.png"
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board["image"] = "simu.png"
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continue
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continue
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local_file = download_board(board["board_id"], self.instance_config_id, board["sequence_id"],
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local_file = download_board(board["board_id"], self.instance_config_id, board["sequence_id"],
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self.settings.source)
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self.settings.source)
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if local_file:
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if local_file:
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board['image'] = local_file
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board['image'] = local_file
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else:
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else:
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board['image'] = "ERROR_FETCHING_FILE"
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board['image'] = "ERROR_FETCHING_FILE"
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logger.error("error downloading board! %s %s %s", self.instance_config_id, board["sequence_id"],
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logger.error("error downloading board! %s %s %s", self.instance_config_id, board["sequence_id"],
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board["board_id"])
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board["board_id"])
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else:
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else:
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board["image"] = "map.png"
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board["image"] = "map.png"
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store.add(Result(type(self), {
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store.add(Result(type(self), {
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@ -202,7 +202,7 @@ class ActivityMapper(Analyzer):
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self.add_location(entry)
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self.add_location(entry)
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elif entry[self.settings.type_field] in self.settings.boards:
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elif entry[self.settings.type_field] in self.settings.boards:
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board_data = get_board_data(self.settings.source, self.instance_config_id, entry["sequence_id"],
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board_data = get_board_data(self.settings.source, self.instance_config_id, entry["sequence_id"],
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entry["board_id"])
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entry["board_id"])
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entry["extra_data"] = board_data
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entry["extra_data"] = board_data
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entry["extra_data"]["activity_type"] = self.last_board_type
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entry["extra_data"]["activity_type"] = self.last_board_type
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entry['coordinate'] = self.new_coordinate()
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entry['coordinate'] = self.new_coordinate()
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@ -218,14 +218,14 @@ class ActivityMapper(Analyzer):
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def classify_entry(self, entry):
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def classify_entry(self, entry):
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entry_type = entry[self.settings.type_field]
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entry_type = entry[self.settings.type_field]
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if self.filters.end(entry):
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if self.filters.end(entry):
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data = {"extra_data": {"activity_type": "map"},"coordinate": self.new_coordinate()}
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data = {"extra_data": {"activity_type": "map"}, "coordinate": self.new_coordinate()}
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data.update(entry)
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data.update(entry)
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self.timeline.append(data)
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self.timeline.append(data)
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return "map"
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return "map"
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if not entry_type in self.settings.boards:
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if not entry_type in self.settings.boards:
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return self.last_board_type
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return self.last_board_type
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board_data = get_board_data(self.settings.source, self.instance_config_id, entry["sequence_id"],
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board_data = get_board_data(self.settings.source, self.instance_config_id, entry["sequence_id"],
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entry["board_id"])
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entry["board_id"])
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for pattern in self.classes:
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for pattern in self.classes:
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if pattern in board_data['class']:
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if pattern in board_data['class']:
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return self.classes[pattern]
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return self.classes[pattern]
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@ -1,7 +1,7 @@
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import logging
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import logging
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from collections import defaultdict, OrderedDict
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from collections import defaultdict, OrderedDict
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from util import json_path
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from analysis.util import json_path
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from . import Result, LogSettings, Analyzer, ResultStore
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from . import Result, LogSettings, Analyzer, ResultStore
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@ -16,9 +16,9 @@ class LocationAnalyzer(Analyzer):
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super().__init__(settings)
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super().__init__(settings)
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self.entries = []
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self.entries = []
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def result(self, store: ResultStore) -> None:
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def result(self, store: ResultStore, **kwargs) -> None:
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self.log.debug(len(self.entries))
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self.log.debug(len(self.entries))
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store.add(Result(type(self), list(self.entries)))
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store.add(Result(type(self), list(self.entries), name=kwargs['name']))
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def process(self, entry: dict) -> bool:
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def process(self, entry: dict) -> bool:
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if entry[self.settings.type_field] in self.settings.spatials:
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if entry[self.settings.type_field] in self.settings.spatials:
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@ -9,8 +9,8 @@ from scipy.interpolate import interp1d
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import networkx as nx
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import networkx as nx
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import itertools
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import itertools
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from analyzers import Store, BiogamesStore, SimulationOrderAnalyzer
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from analysis.analyzers import Store, BiogamesStore, SimulationOrderAnalyzer
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from util.meta_temp import CONFIG_NAMES
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from analysis.util.meta_temp import CONFIG_NAMES
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from . import Render
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from . import Render
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from .. import Result, SimulationRoundsAnalyzer, BoardDurationAnalyzer, ActivityMapper
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from .. import Result, SimulationRoundsAnalyzer, BoardDurationAnalyzer, ActivityMapper
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@ -2,11 +2,13 @@ import json
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import logging
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import logging
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from typing import List
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from typing import List
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import datetime
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import matplotlib.pyplot as plt
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import matplotlib.pyplot as plt
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from analyzers import LogEntryCountAnalyzer
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from analysis.analyzers import LogEntryCountAnalyzer
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from analysis.util.meta_temp import KML_PATTERN
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from . import Render, Result
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from . import Render, Result
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from .. import LocationAnalyzer
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from analysis.analyzers import LocationAnalyzer
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log = logging.getLogger(__name__)
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log = logging.getLogger(__name__)
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@ -39,6 +41,31 @@ class TrackRender(Render):
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return dumps
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return dumps
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def format_time(ts):
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return datetime.datetime.fromtimestamp(ts/1000).strftime("%Y-%m-%dT%H:%M:%S.%f")
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class KMLRender(Render):
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result_types = [LocationAnalyzer]
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def render(self, results: List[Result], name=None):
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for result in self.filter(results):
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times = ["<when>{time}</when>".format(time=format_time(entry["timestamp"])) for entry in result.get()]
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coords = [
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"<gx:coord>{long} {lat} 0.0</gx:coord>"
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.format(
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lat=entry['location']['coordinates'][1],
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long=entry['location']['coordinates'][0])
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for entry in result.get()
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]
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filename = str(result.name)+".kml"
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print(filename)
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with open(filename, "w") as out:
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out.write(KML_PATTERN.format(name=str(result.name), coordinates="\n".join(coords), when="\n".join(times)))
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class HeatMapRender(TrackRender):
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class HeatMapRender(TrackRender):
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weight = 0.01
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weight = 0.01
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@ -2,8 +2,8 @@ import json
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import numpy as np
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import numpy as np
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import analyzers
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import analysis.analyzers
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from util.geo import calc_distance
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from analysis.util.geo import calc_distance
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def time_distribution(store):
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def time_distribution(store):
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@ -97,7 +97,7 @@ def time_distribution(store):
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from collections import defaultdict
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from collections import defaultdict
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import matplotlib.pyplot as plt
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import matplotlib.pyplot as plt
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from util.meta_temp import CONFIG_NAMES
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from analysis.util.meta_temp import CONFIG_NAMES
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keys = [
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keys = [
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"simu",
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"simu",
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@ -1,6 +1,6 @@
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import json
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import json
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import sys
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import sys
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from sources import SOURCES
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from analysis.sources import SOURCES
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def load_source(config):
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def load_source(config):
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@ -28,7 +28,7 @@ class LogSettings:
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self.boards = json_dict['boards']
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self.boards = json_dict['boards']
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for mod in json_dict['analyzers']:
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for mod in json_dict['analyzers']:
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for name in json_dict['analyzers'][mod]:
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for name in json_dict['analyzers'][mod]:
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print(mod, name)
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print(mod, name, getattr(sys.modules[mod], name))
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self.analyzers.append(getattr(sys.modules[mod], name))
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self.analyzers.append(getattr(sys.modules[mod], name))
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self.sequences = json_dict['sequences']
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self.sequences = json_dict['sequences']
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if 'custom' in json_dict:
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if 'custom' in json_dict:
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@ -51,3 +51,7 @@ class LogSettings:
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def load_settings(file: str) -> LogSettings:
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def load_settings(file: str) -> LogSettings:
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return LogSettings(json.load(open(file)))
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return LogSettings(json.load(open(file)))
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def parse_settings(config: str) -> LogSettings:
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return LogSettings(json.loads(config))
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@ -2,16 +2,16 @@ import json
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import logging
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import logging
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from typing import List
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from typing import List
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import analyzers
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from analysis import analyzers
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from analyzers import get_renderer, render
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from analysis.analyzers import get_renderer, render
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from analyzers.analyzer import ResultStore
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from analysis.analyzers.analyzer import ResultStore
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from analyzers.analyzer.default import write_logentry_count_csv, write_simulation_flag_csv
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from analysis.analyzers.analyzer.default import write_logentry_count_csv, write_simulation_flag_csv
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from analyzers.render import wip
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from analysis.analyzers.render import wip
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from analyzers.render.default import LogEntryCountCSV
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from analysis.analyzers.render.default import LogEntryCountCSV, KMLRender
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from analyzers.render.wip import time_distribution, plot_data
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from analysis.analyzers.render.wip import time_distribution, plot_data
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from analyzers.settings import LogSettings, load_settings
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from analysis.analyzers.settings import LogSettings, load_settings, parse_settings
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from loaders import LOADERS
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from analysis.loaders import LOADERS
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from util.processing import grep, run_analysis, src_file
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from analysis.util.processing import grep, run_analysis, src_file
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logging.basicConfig(format='%(levelname)s %(name)s:%(message)s', level=logging.DEBUG)
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logging.basicConfig(format='%(levelname)s %(name)s:%(message)s', level=logging.DEBUG)
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log: logging.Logger = logging.getLogger(__name__)
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log: logging.Logger = logging.getLogger(__name__)
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@ -26,36 +26,39 @@ def urach_logs(log_ids, settings):
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if __name__ == '__main__':
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if __name__ == '__main__':
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settings: LogSettings = load_settings("biogames2.json")
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settings = {}
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log_ids_urach: List[str] = urach_logs([
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log_ids_gf = []
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# "34fecf49dbaca3401d745fb467",
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# settings: LogSettings = load_settings("biogames2.json")
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# "44ea194de594cd8d63ac0314be",
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# log_ids_urach: List[str] = urach_logs([
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# "57c444470dbf88605433ca935c",
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# # "34fecf49dbaca3401d745fb467",
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# "78e0c545b594e82edfad55bd7f",
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# # "44ea194de594cd8d63ac0314be",
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# "91abfd4b31a5562b1c66be37d9",
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# # "57c444470dbf88605433ca935c",
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# "597b704fe9ace475316c345903",
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# # "78e0c545b594e82edfad55bd7f",
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# "e01a684aa29dff9ddd9705edf8",
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# # "91abfd4b31a5562b1c66be37d9",
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"597b704fe9ace475316c345903",
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# # "597b704fe9ace475316c345903",
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"e01a684aa29dff9ddd9705edf8",
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# # "e01a684aa29dff9ddd9705edf8",
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"fbf9d64ae0bdad0de7efa3eec6",
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# "597b704fe9ace475316c345903",
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# "fbf9d64ae0bdad0de7efa3eec6",
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# "e01a684aa29dff9ddd9705edf8",
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"fe1331481f85560681f86827ec", # urach
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# "fbf9d64ae0bdad0de7efa3eec6",
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# "fe1331481f85560681f86827ec"]
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# # "fbf9d64ae0bdad0de7efa3eec6",
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"fec57041458e6cef98652df625",
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# "fe1331481f85560681f86827ec", # urach
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]
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# # "fe1331481f85560681f86827ec"]
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, settings)
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# "fec57041458e6cef98652df625",
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log_ids_gf = grep(["9d11b749c78a57e786bf5c8d28", # filderstadt
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# ]
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"a192ff420b8bdd899fd28573e2", # eichstätt
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# , settings)
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"3a3d994c04b1b1d87168422309", # stadtökologie
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# log_ids_gf = grep(["9d11b749c78a57e786bf5c8d28", # filderstadt
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"fe1331481f85560681f86827ec", # urach
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# "a192ff420b8bdd899fd28573e2", # eichstätt
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"96f6d9cc556b42f3b2fec0a2cb7ed36e" # oberelsbach
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# "3a3d994c04b1b1d87168422309", # stadtökologie
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],
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# "fe1331481f85560681f86827ec", # urach
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"/home/clemens/git/ma/test/src",
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# "96f6d9cc556b42f3b2fec0a2cb7ed36e" # oberelsbach
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settings)
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# ],
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log_ids = src_file("/home/clemens/git/ma/test/filtered_5_actions")
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# "/home/clemens/git/ma/test/src",
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# settings)
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# log_ids = src_file("/home/clemens/git/ma/test/filtered_5_actions")
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#store: ResultStore = run_analysis(log_ids_gf, settings, LOADERS)
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if False:
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#store: ResultStore = run_analysis(log_ids, settings, LOADERS)
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store: ResultStore = run_analysis(log_ids_gf, settings, LOADERS)
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# store: ResultStore = run_analysis(log_ids, settings, LOADERS)
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if False:
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if False:
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for r in get_renderer(analyzers.LocomotionActionAnalyzer):
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for r in get_renderer(analyzers.LocomotionActionAnalyzer):
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@ -69,7 +72,7 @@ if __name__ == '__main__':
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# render(analyzers.ProgressAnalyzer, store.get_all())
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# render(analyzers.ProgressAnalyzer, store.get_all())
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if False:
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if False:
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from analyzers.postprocessing import graph
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from analysis.analyzers.postprocessing import graph
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g = graph.Cache(settings)
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g = graph.Cache(settings)
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g.run(store)
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g.run(store)
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@ -85,7 +88,7 @@ if __name__ == '__main__':
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if False:
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if False:
|
||||||
time_distribution(store)
|
time_distribution(store)
|
||||||
|
|
||||||
if True:
|
if False:
|
||||||
# spatial_data = get_data_distance(store,relative_values=False)
|
# spatial_data = get_data_distance(store,relative_values=False)
|
||||||
# temporal_data = get_data(store,relative_values=False)
|
# temporal_data = get_data(store,relative_values=False)
|
||||||
# spatial_data_rel = get_data_distance(store,relative_values=True)
|
# spatial_data_rel = get_data_distance(store,relative_values=True)
|
||||||
|
|
@ -104,6 +107,18 @@ if __name__ == '__main__':
|
||||||
# plot_time_space_rel(combined, keys)
|
# plot_time_space_rel(combined, keys)
|
||||||
plot_data(combined, wip.keys)
|
plot_data(combined, wip.keys)
|
||||||
|
|
||||||
|
if True:
|
||||||
|
settings: LogSettings = load_settings("../oeb_kml.json")
|
||||||
|
log_ids = src_file("/home/clemens/git/ma/test/oeb_2016_path")
|
||||||
|
log_ids = log_ids[0:2]
|
||||||
|
print(log_ids)
|
||||||
|
store: ResultStore = run_analysis(log_ids, settings, LOADERS)
|
||||||
|
print("render")
|
||||||
|
kml = KMLRender()
|
||||||
|
kml.render(store.get_all())
|
||||||
|
print("done")
|
||||||
|
#for cat in store.get_categories():
|
||||||
|
# render(analyzers.ActivityMapper, store.get_category(cat), name=cat)
|
||||||
|
|
||||||
# for analyzers in analyzers:
|
# for analyzers in analyzers:
|
||||||
# if analyzers.name() in ["LogEntryCount", "ActionSequenceAnalyzer"]:
|
# if analyzers.name() in ["LogEntryCount", "ActionSequenceAnalyzer"]:
|
||||||
|
|
@ -26,7 +26,7 @@ class Biogames(Source):
|
||||||
raise ValueError("missing value " + i)
|
raise ValueError("missing value " + i)
|
||||||
csrf_request = requests.get(kwargs['url'])
|
csrf_request = requests.get(kwargs['url'])
|
||||||
if csrf_request.status_code != 200:
|
if csrf_request.status_code != 200:
|
||||||
raise ConnectionError("unable to obtain CSRF token (" + str(csrf_request) + ")")
|
raise ConnectionError("unable to obtain CSRF token (" + str(csrf_request) + ")", csrf_request.url)
|
||||||
self.cookies['csrftoken'] = csrf_request.cookies['csrftoken']
|
self.cookies['csrftoken'] = csrf_request.cookies['csrftoken']
|
||||||
log.info("obtained CSRF token (" + self.cookies['csrftoken'] + ")")
|
log.info("obtained CSRF token (" + self.cookies['csrftoken'] + ")")
|
||||||
login_payload = {
|
login_payload = {
|
||||||
|
|
@ -97,3 +97,20 @@ CONFIG_NAMES = {
|
||||||
'fe43a0f0-3dea-11e6-a065-00199963ac6e': u'Vorlagen',
|
'fe43a0f0-3dea-11e6-a065-00199963ac6e': u'Vorlagen',
|
||||||
'ff8f1e8f-6cf5-4a7b-835b-5e2226c1e771': u'Bad Urach'
|
'ff8f1e8f-6cf5-4a7b-835b-5e2226c1e771': u'Bad Urach'
|
||||||
}
|
}
|
||||||
|
|
||||||
|
|
||||||
|
KML_PATTERN="""<?xml version="1.0" encoding="UTF-8"?>
|
||||||
|
<kml xmlns="http://www.opengis.net/kml/2.2" xmlns:gx="http://www.google.com/kml/ext/2.2">
|
||||||
|
<Document>
|
||||||
|
<Placemark>
|
||||||
|
<gx:MultiTrack>
|
||||||
|
<gx:Track>
|
||||||
|
{when}
|
||||||
|
{coordinates}
|
||||||
|
</gx:Track>
|
||||||
|
</gx:MultiTrack>
|
||||||
|
{coordinates}
|
||||||
|
</Placemark>
|
||||||
|
</Document>
|
||||||
|
</kml>
|
||||||
|
"""
|
||||||
|
|
@ -1,8 +1,8 @@
|
||||||
import logging
|
import logging
|
||||||
from typing import List
|
from typing import List
|
||||||
|
|
||||||
from analyzers.analyzer import ResultStore, Analyzer
|
from analysis.analyzers.analyzer import ResultStore, Analyzer
|
||||||
from analyzers.settings import LogSettings
|
from analysis.analyzers.settings import LogSettings
|
||||||
|
|
||||||
log: logging.Logger = logging.getLogger(__name__)
|
log: logging.Logger = logging.getLogger(__name__)
|
||||||
|
|
||||||
|
|
@ -31,6 +31,7 @@ def process_log(logfile: str, settings: LogSettings, loaders) -> List[Analyzer]:
|
||||||
def run_analysis(log_ids: list, settings, loaders):
|
def run_analysis(log_ids: list, settings, loaders):
|
||||||
store: ResultStore = ResultStore()
|
store: ResultStore = ResultStore()
|
||||||
for log_id in log_ids:
|
for log_id in log_ids:
|
||||||
|
log.info("LOG_ID: "+ str(log_id))
|
||||||
for analysis in process_log(log_id, settings, loaders):
|
for analysis in process_log(log_id, settings, loaders):
|
||||||
log.info("* Result for " + analysis.name())
|
log.info("* Result for " + analysis.name())
|
||||||
analysis.result(store, name=log_id)
|
analysis.result(store, name=log_id)
|
||||||
|
|
@ -0,0 +1,110 @@
|
||||||
|
import json
|
||||||
|
import logging
|
||||||
|
|
||||||
|
import os
|
||||||
|
import shutil
|
||||||
|
import tempfile
|
||||||
|
import typing
|
||||||
|
|
||||||
|
import requests
|
||||||
|
|
||||||
|
log: logging.Logger = logging.getLogger(__name__)
|
||||||
|
|
||||||
|
|
||||||
|
class Client:
|
||||||
|
host: str = ""
|
||||||
|
cookies: typing.Dict[str, str] = {}
|
||||||
|
headers: typing.Dict[str, str] = {}
|
||||||
|
|
||||||
|
def url(self, path):
|
||||||
|
if self.host:
|
||||||
|
return self.host + path
|
||||||
|
return path
|
||||||
|
|
||||||
|
def get(self, url, **kwargs) -> requests.models.Response:
|
||||||
|
return requests.get(self.url(url), cookies=self.cookies, headers=self.headers, **kwargs)
|
||||||
|
|
||||||
|
def post(self, url, data, **kwargs) -> requests.models.Response:
|
||||||
|
return requests.post(self.url(url), data, cookies=self.cookies, headers=self.headers, **kwargs)
|
||||||
|
|
||||||
|
def download_file(self, url, target, **kwargs) -> bool:
|
||||||
|
with open(target, "wb") as out:
|
||||||
|
try:
|
||||||
|
download = self.get(url, stream=True, **kwargs)
|
||||||
|
shutil.copyfileobj(download.raw, out)
|
||||||
|
except Exception as e:
|
||||||
|
log.exception(e)
|
||||||
|
os.remove(target)
|
||||||
|
return False
|
||||||
|
return True
|
||||||
|
|
||||||
|
def download_files(self, urls, **kwargs) -> tempfile.TemporaryDirectory:
|
||||||
|
target = tempfile.TemporaryDirectory()
|
||||||
|
for path in urls:
|
||||||
|
filename = os.path.join(target.name, path.split("/")[-1])
|
||||||
|
self.download_file(path, filename, **kwargs)
|
||||||
|
return target
|
||||||
|
|
||||||
|
|
||||||
|
class BiogamesClient(Client):
|
||||||
|
config_fields: typing.Dict[str, typing.List[str]] = {
|
||||||
|
'login': ('username', 'password', 'host'),
|
||||||
|
'session': ('sessionid', 'csrftoken', 'host'),
|
||||||
|
}
|
||||||
|
login_url: str = "/game2/auth/json-login"
|
||||||
|
list_url: str = "/game2/instance/log/list/"
|
||||||
|
headers: typing.Dict[str, str] = {'Accept': 'application/json'}
|
||||||
|
|
||||||
|
def __init__(self, **kwargs):
|
||||||
|
match = {j: all([i in kwargs for i in self.config_fields[j]]) for j in self.config_fields}
|
||||||
|
valid = filter(lambda x: match[x], match)
|
||||||
|
if not valid:
|
||||||
|
raise ValueError("missing parameter (" + str(self.config_fields) + ")")
|
||||||
|
self.config = kwargs
|
||||||
|
self.cookies = {}
|
||||||
|
self.host = self.config['host']
|
||||||
|
if 'session' in valid:
|
||||||
|
self.cookies = kwargs
|
||||||
|
|
||||||
|
def login(self) -> bool:
|
||||||
|
csrf_request = self.get(self.list_url)
|
||||||
|
if not csrf_request.ok:
|
||||||
|
raise ConnectionError("Unable to obtain CSRF token (" + str(csrf_request) + ")")
|
||||||
|
self.cookies['csrftoken'] = csrf_request.cookies['csrftoken']
|
||||||
|
login_payload = {
|
||||||
|
'username': self.config['username'],
|
||||||
|
'password': self.config['password'],
|
||||||
|
'next': '',
|
||||||
|
'csrfmiddlewaretoken': 'csrftoken',
|
||||||
|
}
|
||||||
|
login = self.post(self.login_url, json.dumps(login_payload))
|
||||||
|
if not login.ok:
|
||||||
|
raise ConnectionError("Unable to authenticate", login, login.text)
|
||||||
|
self.cookies['sessionid'] = login.cookies['sessionid']
|
||||||
|
print(self.cookies)
|
||||||
|
return True
|
||||||
|
|
||||||
|
def list(self) -> dict:
|
||||||
|
print(self.cookies)
|
||||||
|
logs = self.get(self.list_url)
|
||||||
|
if not logs.ok:
|
||||||
|
raise ConnectionError("HTTP fail", logs, logs.text)
|
||||||
|
return logs.json()
|
||||||
|
|
||||||
|
def load_all_logs(self) -> tempfile.TemporaryDirectory:
|
||||||
|
return self.download_files([i["file_url"] for i in self.list()])
|
||||||
|
|
||||||
|
|
||||||
|
CLIENTS: typing.Dict[str, Client] = {
|
||||||
|
"Biogames": BiogamesClient,
|
||||||
|
}
|
||||||
|
|
||||||
|
if __name__ == '__main__':
|
||||||
|
# c = BiogamesClient(host="http://biodiv", username="ba", password="853451")
|
||||||
|
# print(c.login())
|
||||||
|
# print(json.dumps(c.list(), indent=1))
|
||||||
|
# print(type(c.load_all_logs()))
|
||||||
|
# print(type(c.get("/")))
|
||||||
|
c = BiogamesClient(host="http://biodiv", **{'csrftoken': 'IgbwP83iEibW6RE7IADIFELYdbx0dvqQ',
|
||||||
|
'sessionid': 'zntsj09d92tjos1b6ruqjthlzv60xdin'})
|
||||||
|
print(json.dumps(c.list(), indent=1))
|
||||||
|
|
@ -0,0 +1,41 @@
|
||||||
|
version: "3"
|
||||||
|
|
||||||
|
services:
|
||||||
|
app:
|
||||||
|
image: docker.clkl.de/ma/celery:0.1
|
||||||
|
build: .
|
||||||
|
volumes:
|
||||||
|
- ./:/app
|
||||||
|
working_dir: /app/selector
|
||||||
|
command: python3 webserver.py
|
||||||
|
environment:
|
||||||
|
- PYTHONPATH=/app
|
||||||
|
networks:
|
||||||
|
- default
|
||||||
|
- traefik_net
|
||||||
|
labels:
|
||||||
|
- "traefik.enable=true"
|
||||||
|
- "traefik.port=5000"
|
||||||
|
- "traefik.docker.network=traefik_net"
|
||||||
|
- "traefik.url.frontend.rule=Host:select.ma.potato.kinf.wiai.uni-bamberg.de"
|
||||||
|
|
||||||
|
|
||||||
|
redis:
|
||||||
|
image: redis:4-alpine
|
||||||
|
|
||||||
|
|
||||||
|
|
||||||
|
celery:
|
||||||
|
image: docker.clkl.de/ma/celery:0.1
|
||||||
|
build: .
|
||||||
|
environment:
|
||||||
|
- PYTHONPATH=/app
|
||||||
|
volumes:
|
||||||
|
- ./:/app
|
||||||
|
working_dir: /app/tasks
|
||||||
|
command: celery -A tasks worker --loglevel=info
|
||||||
|
|
||||||
|
networks:
|
||||||
|
traefik_net:
|
||||||
|
external:
|
||||||
|
name: traefik_net
|
||||||
|
|
@ -1,8 +1,13 @@
|
||||||
requests==2.18.4
|
requests==2.18.4
|
||||||
numpy==1.13.1
|
numpy==1.13.1
|
||||||
matplotlib==2.1.0
|
matplotlib==2.1.0
|
||||||
osmnx==0.6
|
#osmnx==0.6
|
||||||
networkx==2.0
|
networkx==2.0
|
||||||
pydot==1.2.3
|
#pydot==1.2.3
|
||||||
scipy==1.0.0
|
scipy==1.0.0
|
||||||
ipython==6.2.1
|
#ipython==6.2.1
|
||||||
|
|
||||||
|
flask==0.12.2
|
||||||
|
|
||||||
|
celery==4.1.0
|
||||||
|
redis==2.10.6
|
||||||
|
|
@ -0,0 +1,4 @@
|
||||||
|
function validateSettings() {
|
||||||
|
alert(document.getElementById('safety').checked);
|
||||||
|
return false;
|
||||||
|
}
|
||||||
|
|
@ -0,0 +1,6 @@
|
||||||
|
body {
|
||||||
|
background-color: aqua;
|
||||||
|
}
|
||||||
|
#data{
|
||||||
|
display: none;
|
||||||
|
}
|
||||||
|
|
@ -0,0 +1,5 @@
|
||||||
|
<!doctype html>
|
||||||
|
<title>…</title>
|
||||||
|
<link rel="stylesheet" type="text/css" href="{{ url_for('static', filename='style.css') }}">
|
||||||
|
<script type="application/javascript" src="{{url_for('static', filename='script.js') }}"></script>
|
||||||
|
{% block body %} {% endblock %}
|
||||||
|
|
@ -0,0 +1,19 @@
|
||||||
|
{% extends "base.html" %}
|
||||||
|
{% block body %}
|
||||||
|
<form action="/start" method="post">
|
||||||
|
<div id="data"> {{logs}} </div>
|
||||||
|
<ul>
|
||||||
|
{% for log in logs %}
|
||||||
|
<li>
|
||||||
|
<input type="checkbox" name="logs" value="{{log['@id']}}">
|
||||||
|
{{log.start_date}}: {{log.player_group_name}} (→{{log.end_date}})
|
||||||
|
</li>
|
||||||
|
<!--{{log}}-->
|
||||||
|
{% endfor %}
|
||||||
|
</ul>
|
||||||
|
<input type="checkbox" id="safety"><label for="safety">Confirm selection</label>
|
||||||
|
<input type="submit">
|
||||||
|
|
||||||
|
</form>
|
||||||
|
|
||||||
|
{% endblock %}
|
||||||
|
|
@ -0,0 +1,14 @@
|
||||||
|
{% extends "base.html" %}
|
||||||
|
{% block body %}
|
||||||
|
<form action="/login" method="post">
|
||||||
|
<select name="game">
|
||||||
|
{% for game in clients %}
|
||||||
|
<option>{{ game }}</option>
|
||||||
|
{% endfor %}
|
||||||
|
</select>
|
||||||
|
<input type="text" name="username" placeholder="username"/>
|
||||||
|
<input type="password" name="password" placeholder="passwort"/>
|
||||||
|
<input type="submit">
|
||||||
|
</form>
|
||||||
|
|
||||||
|
{% endblock %}
|
||||||
|
|
@ -0,0 +1,53 @@
|
||||||
|
import typing
|
||||||
|
import uuid
|
||||||
|
|
||||||
|
from clients.webclients import Client, CLIENTS
|
||||||
|
|
||||||
|
from flask import Flask, render_template, request, redirect, session
|
||||||
|
|
||||||
|
BIOGAMES_HOST = "http://biogames.potato.kinf.wiai.uni-bamberg.de"
|
||||||
|
|
||||||
|
app = Flask(__name__)
|
||||||
|
clients: typing.Dict[str, Client] = {}
|
||||||
|
|
||||||
|
@app.route("/")
|
||||||
|
def index():
|
||||||
|
return render_template("index.html", clients=CLIENTS)
|
||||||
|
|
||||||
|
|
||||||
|
@app.route("/login", methods=["POST"])
|
||||||
|
def login():
|
||||||
|
game = request.form["game"]
|
||||||
|
if not game in CLIENTS:
|
||||||
|
return redirect("/")
|
||||||
|
client = CLIENTS[game](host=BIOGAMES_HOST, username=request.form['username'], password=request.form['password'])
|
||||||
|
if client.login():
|
||||||
|
session['logged_in'] = True
|
||||||
|
session['uid'] = str(uuid.uuid4())
|
||||||
|
session['cookies'] = client.cookies
|
||||||
|
session['game'] = game
|
||||||
|
session['host'] = BIOGAMES_HOST
|
||||||
|
clients[session['uid']] = client
|
||||||
|
return redirect("/games")
|
||||||
|
return redirect("/")
|
||||||
|
|
||||||
|
|
||||||
|
@app.route("/games")
|
||||||
|
def games():
|
||||||
|
if not session['logged_in']:
|
||||||
|
return redirect("/")
|
||||||
|
if session['logged_in'] and not session['uid'] in clients:
|
||||||
|
clients[session['uid']] = CLIENTS[session['game']](host=session['host'], **session['cookies'])
|
||||||
|
return render_template("games.html", logs=clients[session['uid']].list())
|
||||||
|
|
||||||
|
@app.route("/start", methods=['POST'])
|
||||||
|
def start():
|
||||||
|
pass
|
||||||
|
|
||||||
|
@app.route("/status")
|
||||||
|
def status():
|
||||||
|
pass
|
||||||
|
|
||||||
|
if __name__ == '__main__':
|
||||||
|
app.config.update({"SECRET_KEY":"59765798-2784-11e8-8d05-db4d6f6606c9"})
|
||||||
|
app.run(host="0.0.0.0", debug=True)
|
||||||
|
|
@ -1,8 +1,9 @@
|
||||||
$.getJSON("data/ff8f1e8f-6cf5-4a7b-835b-5e2226c1e771_03b9b6b4-c8ab-4182-8902-1620eebe8889.json", function (data) { //urach
|
//$.getJSON("data/ff8f1e8f-6cf5-4a7b-835b-5e2226c1e771_03b9b6b4-c8ab-4182-8902-1620eebe8889.json", function (data) { //urach
|
||||||
//$.getJSON("data/ff8f1e8f-6cf5-4a7b-835b-5e2226c1e771_de7df5b5-edd5-4070-840f-68854ffab9aa.json", function (data) { //urach
|
//$.getJSON("data/ff8f1e8f-6cf5-4a7b-835b-5e2226c1e771_de7df5b5-edd5-4070-840f-68854ffab9aa.json", function (data) { //urach
|
||||||
//$.getJSON("data/90278021-4c57-464e-90b1-d603799d07eb_07da99c9-398a-424f-99fc-2701763a63e9.json", function (data) { //eichstätt
|
//$.getJSON("data/90278021-4c57-464e-90b1-d603799d07eb_07da99c9-398a-424f-99fc-2701763a63e9.json", function (data) { //eichstätt
|
||||||
//$.getJSON("data/13241906-cdae-441a-aed0-d57ebeb37cac_d33976a6-8a56-4a63-b492-fe5427dbf377.json", function (data) { //stadtökologie
|
//$.getJSON("data/13241906-cdae-441a-aed0-d57ebeb37cac_d33976a6-8a56-4a63-b492-fe5427dbf377.json", function (data) { //stadtökologie
|
||||||
//$.getJSON("data/5e64ce07-1c16-4d50-ac4e-b3117847ea43_2f664d7b-f0d8-42f5-8731-c034ef86703e.json", function (data) { //filderstadt
|
$.getJSON("data/5e64ce07-1c16-4d50-ac4e-b3117847ea43_2f664d7b-f0d8-42f5-8731-c034ef86703e.json", function (data) { //filderstadt
|
||||||
|
//$.getJSON("data/17d401a9-de21-49a2-95bc-7dafa53dda64_98edcb70-03db-4465-b185-a9c9574995ce.json", function (data) { //oeb2016
|
||||||
var images = {};
|
var images = {};
|
||||||
var tiles = {
|
var tiles = {
|
||||||
"openstreetmap": L.tileLayer('https://{s}.tile.openstreetmap.org/{z}/{x}/{y}.png', {
|
"openstreetmap": L.tileLayer('https://{s}.tile.openstreetmap.org/{z}/{x}/{y}.png', {
|
||||||
|
|
|
||||||
|
|
@ -0,0 +1,14 @@
|
||||||
|
from celery import Celery
|
||||||
|
#from analysis import log_analyzer as la
|
||||||
|
|
||||||
|
app = Celery('tasks', backend='redis://redis', broker='redis://redis')
|
||||||
|
|
||||||
|
|
||||||
|
@app.task
|
||||||
|
def add(x, y):
|
||||||
|
return x + y
|
||||||
|
|
||||||
|
#@app.task
|
||||||
|
#def analyze(config, log_ids):
|
||||||
|
# settings = la.parse_settings(config)
|
||||||
|
# store = la.run_analysis(log_ids, settings, la.LOADERS)
|
||||||
Loading…
Reference in New Issue